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ensemble mart
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reset
6
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1.6k
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biomart R code cannot retrieve gene symbol
biomart
ensemblbiomart
ensemble mart
6.8 years ago
emmak
▴ 20
0
votes
0
replies
1.2k
views
News:
Ensembl 87 is out!
ensembl
ensemble mart
ensembl mart
biomart
News
8.1 years ago
amonida
▴ 20
0
votes
2
replies
1.3k
views
ENSEMBL_MART_FUNCGEN not accessible through biomaRt?
biomart
regulatory
ensemble mart
ensembldb
updated 8.6 years ago by
Thomas Maurel
▴ 800 • written 8.6 years ago by
Sigve Nakken
▴ 50
3
votes
3
replies
1.7k
views
Premature EOF within Description Field - Bos Taurus
biomart
ensemble mart
updated 8.8 years ago by
Martin Morgan
25k • written 8.8 years ago by
andrew.j.skelton73
▴ 370
0
votes
0
replies
1.3k
views
Low yield mapping ensembl transcript ids to entrez gene ids in biomart
biomart
ensembl
ensemble mart
entrez gene identifiers
9.0 years ago • updated 8.9 years ago
serpalma.v
▴ 60
0
votes
0
replies
1.8k
views
News:
Ensembl 83 is out!
ensemble mart
ensembl
biomart
ensembl release
News
9.1 years ago
amonida
▴ 20
1
vote
3
replies
2.7k
views
getSequence from biomaRt but Error in martCheck
R
biomart
ensemble mart
updated 9.2 years ago by
Hervé Pagès
16k • written 9.2 years ago by
Gabriela Santos
• 0
7 results • Page
1 of 1
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Comment: Are unequal sample sizes in differential gene expression (DGE) analysis a proble
by
Amora
• 0
Both edgeR and DESeq2 can handle unequal group sizes if you ensure proper quality control and variance estimation. [sprunki retake][1] …
Comment: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and G
by
Amora
• 0
You did a great job giving an overview.....[slope][1] better than the bioconductor group! [1]: https://slopeio.org
Comment: contrast matrix design for a continuous variable
by
dtzhu337
• 0
Hi Gordon, Thank you very much for your answer. Actually the variable X is the age, which I am also interested in. Somehow, age and V1 are…
Answer: SingleCellExperiment convenience function for metadata+expression?
by
Peter Hickey
▴ 750
Hi Sarah, `scuttle::makePerCellDF()` / `scuttle::makePerFeatureDF()` and `scater::ggcells()` / `scater::ggfeatures()`, which build upon th…
Comment: How to sort negative log2FC or FC in RNAseq for GSEA?
by
QN
▴ 10
Thank you ATpoint for your response! In the result of GSEA, like you indicated, there will be gene sets that have positive NES and gene se…
Votes
Answer: SingleCellExperiment convenience function for metadata+expression?
How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.
Answer: EdgeR Biological CVs
Answer: Error in download.file for TCGAutils::symbolsToRanges
Answer: Error in download.file for TCGAutils::symbolsToRanges
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